# solvent-accessible dot surface with trace of solvent centers

• load caffeine.xyz;set perspectivedepth off;set solvent on;dots on;
• load caffeine.xyz;set solvent on;dots on;moveto 1.0 -561 -26 -827 71.3 124;
• load C6H6.smol;select */1;set solvent on;dots on;moveto 1.0 -561 -26 -827 71.3 124;
• load 1crn.pdb;set solvent on;dots on;moveto 1.0 853 285 437 144.4 317;
• set testflag1 off;set radius 1.2000;set solvent on;dots on; #experimental
• set testflag1 on;set radius 1.2001;set solvent on;dots on; #Jmol 10.2
• depth 50;slab 100;slab on;
• slab 50;depth 0;slab on;
• slab off;
• wireframe off;spacefill off;
• wireframe 0.05;spacefill 0.15;
• set radius 0.3;set solvent on; dots on;
• set radius 0.7;set solvent on; dots on;
• set radius 1.2;set solvent on; dots on # the default
• set testflag2 on; # show contact lines
• set testflag2 off;
• set testflag3 on; # "clay model" solid surface
• set testflag3 off;
• set testflag4 on; # trace solvent centers
• set testflag4 off;
• load 1crn.pdb; set testflag1 on; set solvent on; dots on; slab 50; slab on;moveto 1.0 244 -141 -960 108.1 1260;

THIS PAGE DEMONSTRATES PROTOTYPE FUNCTIONALITY
NOT AVAILABLE IN JMOL 10.2